Installation

You can install BioMarkovChains from the julia REPL. Press ] to enter pkg mode, and enter the following:

] add BioVossEncoder

Create a Voss matrix from a DNA sequence

Once installed, you can use the vossmatrix function to generate a Voss matrix from a DNA sequence. Here is an example:

julia> using BioSequences, BioVossEncoder

julia> seq = dna"ACGT"
julia> vossmatrix(seq)

This will produce the following 4×4 BitMatrix:

4×4 BitMatrix:
 1  0  0  0
 0  1  0  0
 0  0  1  0
 0  0  0  1